What's the best eQMS software in 2024?


    An electronic quality management system (eQMS) doesn’t just make life easier for quality teams. As the life science world gets increasingly competitive, regulated and scrutinized, the right eQMS software can make the difference between success and failure.

    Quality management software is an investment in your life science company's innovation, supporting the design of safe and compliant products that exceed customer expectations. So how do you determine the right quality management solutions for you?

    Selecting the best quality management software requires careful consideration - not only the features, but also the user experience, training and the quality software's ability to grow with your business.

    To help your search, we've compiled a list of the top quality management software systems available to life science companies in 2024.


    Table of Contents

    1. What is eQMS software?
    2. eQMS software cost
    3. eQMS software requirements
    4. eQMS software examples
    5. Best eQMS options
      1. Qualio
      2. MasterControl
      3. Veeva
      4. Qualityze
      5. Trackwise
    6. Choosing the best eQMS for you




    What is eQMS software?


    eQMS software is a digital tool for managing the quality and compliance requirements of the modern business.

    A quality management system, or QMS, is the bundle of activities and processes that interact to guarantee the quality of your products and services.

    Quality management system software, or QMS software, turns that QMS into an 'e'QMS by digitizing those activities and processes.

    An eQMS is an electronic quality management system that enables quality teams to centrally manage and monitor their quality and compliance processes. eQMS software helps regulated companies, like life science, manufacturing and food organizations, create, maintain and report on key quality data elements throughout their product lifecycles.

    Features like document management, training management and non-conformance tracking are just a few of the capabilities required in modern quality management systems. Software for quality management system compliance is becoming an increasingly popular way for highly regulated organizations to manage these critical quality activities.


    Understanding quality management system software


    Quality management software, in short, is the method for structuring and running an electronic quality management system.

    The primary benefit of an effective eQMS, powered by quality management system software, is that it assists you in automating the traditionally manual business processes connected to quality, compliance and product development.

    best eqms software


    In particular, businesses embrace quality management software and turn to eQMS systems to:

    • Move away from paper and spreadsheets
    • Connect employees to a single source of quality truth
    • Save money with efficient digital quality practices


    best eqms software


    eQMS software cost


    How much does eQMS software cost? 

    Quality management solutions for large, multinational enterprise organizations can stretch into six- and even seven-figure costs, while leaner, more focused quality management software systems for start-ups and scale-ups start in the low tens of thousands of dollars for an annual subscription.

    All this is to say: costs can vary significantly depending on the type of quality software you require.

    As such, it's important to pinpoint your exact quality management system software requirements as you scope potential platforms.

    It's also important to remember that software for quality management system compliance typically pays for itself in a matter of months - so don't be put off by the up-front investment costs. Process efficiencies, faster pathways to market, slimmed-down audit costs and slicing the risk of regulatory fines are all very real ways for your eQMS investment to pay for itself many times over.


    Quality management software requirements


    Most quality management system software is designed with a particular business type, size or shape in mind. Some offer specific value for life science companies, while others are favored by food and manufacturing businesses. A global pharmaceutical brand with an extensive product portfolio will have different eQMS software needs than a medical device start-up focused on getting to market. 

    Choosing quality management solutions designed specifically for organizations like your own will translate to faster implementation, stronger adoption and swifter time to value. For highly regulated companies in sectors like life science, choosing eQMS systems comes with a lot of functionality considerations

    Let's look at some examples below.


    eQMS software examples


    Example eQMS features include:

    • Document management
    • Design controls (for medical device companies)
    • Risk management
    • Training management
    • Audit management
    • Corrective and preventive action (CAPA) management
    • Supplier management


    On top of this core quality management solution functionality, you should consider niche features and services that could be critical to your business, such as:

    • Compliance with industry document integrity standards, like ALCOA+ or the FDA's 21 CFR Part 11 e-signature requirements
    • Customer support that fits your needs
    • Cloud-based access for a remote, post-COVID world
    • Validation: how quick and easy is it with each vendor?


    12 questions to ask before you buy an eQMS


    Your quality compliance software should be targeted appropriately to your organization’s growth stage, budget, structure and industry. Choosing an eQMS that doesn't streamline efficiently or fit your use case can lead to wasted cost, non-compliance, or costly software bloat from overly extensive configurations. 

    We don't want that to happen to you. Dive into our recommendations of the top eQMS providers on the market to find the quality compliance software that's best for you.


    Best quality management software options

    1. Qualio


    Best eQMS Software

    Our eQMS is designed to help small- to medium-sized life science companies scale and bring their products to market.

    Qualio is an ideal quality management software eQMS platform for start-ups facing the world's tightest regulatory requirements, from FDA and ISO demands to GxP, and is built to do 3 things especially well: 

    1. Increase your revenue through improved velocity to market

    2. Slice your total cost of quality

    3. Mitigate your risk with improved quality processes


    Qualio's eQMS features include:

    And more!

    Best for: Small- to mid-market organizations with aggressive growth goals that want affordable eQMS software for quality management and compliance.

    Qualio is the only eQMS solution designed specifically for start-ups, small to mid-size business, and life sciences companies in the scale phase, incorporating FDA, cGMP and ISO requirements as standard for pharma, biotech and medical device manufacturers.

    And we're proud of our diverse customer base. Our quality management software systems are used from America to Europe, including the UK, Ireland, Sweden, Denmark, Switzerland, Norway, Belgium, Israel, Australia, New Zealand, USA and Canada.


    Quality management solution scoping tip

    You might be thinking: "this is Qualio's website, of course they'd put themselves #1!" This kind of caution and awareness of bias is important as you hunt for an eQMS vendor.

    To remedy bias, always look at customer reviews to see if a prospective quality management system software vendor is really doing what they say they can do.



    • High customer satisfaction 
    • High-touch customer success support
    • Extra quality and regulatory support for businesses with limited quality resource 
    • Simple, powerful UX and usability
    • Only eQMS with complete in-app document editing, powered by an intuitive document editor - no more flitting between Office and your quality system!
    • Cloud-based 
    • Rapid set-up and validation timeframes
    • Integration with other business tools like Jira and Salesforce



    • One user reported challenges importing complex database schema
    • No ERP integrations yet
    • Not designed for extensive lengthy customization 
    • US and EMEA footprint, limited presence elsewhere



    2. MasterControl

    Best eQMS Softwares


    This eQMS is a well-known brand in the life sciences industry and among the most widely adopted quality management software systems in the vertical. Current users include several major regulatory agencies and 1,000 enterprises in 30 countries.

    MasterControl's eQMS functionality is designed to address compliance and quality management in product development, clinical trials, supplier management, regulatory risk management, manufacturing and post-market use cases.

    Best for: MasterControl is positioned as a quality management solution for global enterprises with a large portfolio that spans the product development lifecycle. It may be right for your organization if you need complex, highly configurable eQMS software and can dedicate significant resources toward implementation and customization.


    • High connectivity between modules and processes
    • Robust features for collaboration and administration
    • Users report satisfaction with efficient document management features
    • The newly designed user interface is accessible and intuitive



    • Pricing is described as expensive and inflexible by adopters
    • Reported issues with system and search speed
    • Only offers exact match search functionality
    • The web app is only compatible with Internet Explorer
    • Challenging usability



    3. Veeva


    Best eQMS Software


    Veeva is a long-established eQMS provider with a large, complex cloud quality software platform to match.

    Over 1000 enterprise businesses use Veeva for their quality management software needs, and the company offers a vast range of eQMS tools and features from Vault QMS to Vault QualityDocs, Vault LIMS and Vault Station Manager.

    Best for: Enterprise organizations that can commit significant budget towards product configuration and don't need rapid implementation of their eQMS.

    Veeva skews towards a life science customer base, but it isn't a dedicated industry tool - and so cosmetics, chemical and consumer good companies also use their quality management system software.


    • Not industry-specific, could be broadly applied in several verticals
    • Designed for enterprise organizations with scope, complexity and budget to match
    • Dedicated LIMS, clinical trial and CRM tools available within suite
    • Full 'bells and whistles' approach with layers of functionality for any niche user need
    • GxP training courses also available



    • Expensive
    • Complex, with long implementation and training times and potentially blunted adoption
    • No in-app document collaboration/editing
    • No pre-built system templates/content
    • Some customer reports of difficulty using day-to-day
    • No design control features for medical device customers


    4. Qualityze


    Best eQMS Software

    This vendor offers two distinct eQMS products with the same name, designed for the life science and manufacturing industries respectively.

    This closed-loop software includes a full range of eQMS features for managing documents, non-conformances, customer complaints, suppliers, audits and other activities required to comply with FDA cGMP, ISO 13485, Pharmaceuticals and Medical Devices Agency (PMDA), and Therapeutic Goods Administration (TGA) demands.

    Best for: Organizations using Salesforce or that have on-site Salesforce experts. It’s also relatively unique in support of PMDA and TGA requirements. User-provided data on software review source G2 indicates Qualityze’s customer base comprises primarily mid-sized and enterprise organizations.


    • eQMS built on Salesforce
    • Out-of-the-box functionality
    • Intuitive user experience
    • Supports the roll-out of modules based on need


    • Limited user reviews compared to other solutions
    • One user reported they’d like to see more customization
    • Not compatible with Google Drive
    • Users report a high cost to performance ratio


    5. TrackWise


    Best eQMS Software


    Sparta Systems’ TrackWise product is an eQMS software platform designed for organizations subject to GMP requirements. The vendor positions the product as a comprehensive eQMS software solution designed to increase visibility and improve organizational efficiency in a competitive market.

    The system offers the potential to integrate into a complex software ecosystem at enterprise organizations, including real-time integration with ERP, CRM, laboratory information management (LIMS), and manufacturing execution system (MES) applications. 

    Best for: Larger organizations seeking a robust eQMS software solution should consider TrackWise. G2 user-reported data indicates the majority of TrackWise adopters are very large organizations. TrackWise’s potential for integration is a significant strength, but also a necessity for highly regulated businesses: the software’s features are not sufficient on their own to embed compliance with ISO 13485 and other life science standards.


    • Quality control software with a wide range of workflows and modules
    • Scalable and designed for multi-site implementations
    • Extremely flexible system supports extensive customization



    • Does not include archiving or retention features
    • Does not include controls testing
    • High training barrier, confusion, and functionality issues reported by users
    • User experience is not very intuitive


    Choosing the best eQMS 


    Thanks to the growing life science industry, eQMS options are growing rapidly. Don't settle for quality management solutions that aren't purpose-built for your industry, that exceed your budget, or that demand extensive configuration.


    Compare eQMS providers in more detail


    When it comes to finally choosing the best eQMS for you, double and triple check the key factors of user-friendliness, scalability, industry compliance and cost. Additionally, make sure you understand what type of support your prospective quality management software systems offer, and how often they're updated.

    By doing your research and making an informed decision, you can make sure that you choose an eQMS system that best fits your company’s needs for the long term.

    Today, the market offers eQMS system software that's flexible, cloud-based, and more cost-effective. The best eQMS for your company is the one that most closely aligns with your product and team specific goals and help you reach your next phase of growth.

    Want to start your search right now? We can show you around Qualio ASAP.